Sessions will be composed of 3-4 talks, 25 minutes each with time for questions. There will be a total of 3 sessions, followed by a poster session. Individuals interested in being considered for a poster presentation should submit an abstract with their registration.
Tentative schedule:
| Registration and Opening Remarks (Ford Alumni Center – Lee Barlow Giustina Ballroom) | |||
|---|---|---|---|
| 8:30 AM | BGMP Staff | University of Oregon | Registration and coffee/refreshments |
| 9:00 AM | Jayanth Banavar | University of Oregon | Opening remarks |
| Session 1 (Ford Alumni Center – Lee Barlow Giustina Ballroom) | |||
| 9:15 AM | Nyasha Chambwe | Institute of Systems Biology | A Cloud-Based Resource for Synthetic Lethal Interaction Prioritization |
| 9:45 AM | Brian Lee | UCSC Genome Browser | New features and hidden treasures of the UCSC Genome Browser for visualizing genomics |
| 10:15 AM | Maryam Shenasa | Thermo Fisher Scientific | Thermo Fisher: Company Overview |
| 10:30 AM | Aren Ewing | Thermo Fisher Scientific | Thermo Fisher Scientific CSD Bioinformatics and Assay Design |
| 10:45 AM | Coffee Break | ||
| Session 2 – BGMP Alumni Perspectives (Ford Alumni Center – Lee Barlow Giustina Ballroom) | |||
| 11:00 AM | Summer Elastady | NanoString | No Reference: Sequencing in uncharted territory |
| 11:30 AM | Will Sullivan | Human Cell Atlas | Single Cell: Building an Atlas |
| 12:00 PM | Adrian Bubie | Icahn School of Medicine at Mount Sinai | Evaluating tumor fitness and immune activity in the checkpoint treated and endogenous settings |
| Lunch | Caribbean Buffet: Smoked jerk chicken, Jerk tofu, Strawberry mango salad, Pineapple cilantro rice, House black beans, Grilled zucchini | ||
| Session 3 (Ford Alumni Center – Lee Barlow Giustina Ballroom) | |||
| 1:30 PM | Blair Benham-Pyle | Stowers Institute for Medical Research | A single cell reconstruction of planarian regeneration |
| 2:00 PM | Paul Spellman | Oregon Health and Sciences University | Computational Cancer Biology at the Knight Cancer Institute |
| 2:30 PM | Lisa Bramer | Pacific Northwest National Lab | Enhancing Omics Data Interpretation using Visualization and Data Integration |
| 3:00 PM | Coffee Break | ||
| 3:15 PM | Yipeng Wang | Epic Sciences | Utilization of Computer Vision, Single Cell Sequencing and Machine Learning in the Development of Circulating Tumor Cell (CTC) Predictive Biomarkers in Metastatic Castration Resistant Prostate Cancer (mCRPC) |
| 3:45 PM | Nicholas Johnson | Virginia Commonwealth University | Pathogenesis of Congenital Myotonic Dystrophy |
| 4:15 PM | Julia Zeitlinger | Stowers Institute for Medical Research | Using deep learning to understand the cis-regulatory code in mouse embryonic stem cells |
| 4:45 PM | Kevin Matlock | Omics Data Automation | ODA – Breaking Silos for Better Care |
| 5:00 PM | Bill Cresko | University of Oregon | Closing remarks |
| Session 4 – Poster Session (Ford Alumni Center – Susie & Randy Papé Hearth Foyer) | |||
| 5:15 PM | Poster Session and Reception | ||
| 7:00 PM | Meeting End | ||